Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.06■□□□□ 0.96
PHGDHO43175 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PHGDHO43175 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
PHGDHO43175 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHGDHO43175 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.05■□□□□ 0.96
PHGDHO43175 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 AP006587.3-201ENST00000525742 1516 ntBASIC21.05■□□□□ 0.96
PHGDHO43175 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHGDHO43175 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.05■□□□□ 0.96
PHGDHO43175 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.05■□□□□ 0.96
PHGDHO43175 SMUG1P1-201ENST00000590640 811 ntBASIC21.05■□□□□ 0.96
PHGDHO43175 AL136162.1-201ENST00000607711 1078 ntBASIC21.05■□□□□ 0.96
PHGDHO43175 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.05■□□□□ 0.96
PHGDHO43175 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHGDHO43175 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHGDHO43175 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.05■□□□□ 0.96
PHGDHO43175 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PHGDHO43175 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PHGDHO43175 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.04■□□□□ 0.96
PHGDHO43175 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.04■□□□□ 0.96
PHGDHO43175 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.04■□□□□ 0.96
PHGDHO43175 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PHGDHO43175 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.04■□□□□ 0.96
PHGDHO43175 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.04■□□□□ 0.96
PHGDHO43175 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHGDHO43175 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.03■□□□□ 0.96
PHGDHO43175 AC133561.4-201ENST00000566112 224 ntBASIC21.03■□□□□ 0.96
PHGDHO43175 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHGDHO43175 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
PHGDHO43175 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.03■□□□□ 0.96
PHGDHO43175 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PHGDHO43175 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHGDHO43175 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.96
PHGDHO43175 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PHGDHO43175 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PHGDHO43175 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.96
PHGDHO43175 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.02■□□□□ 0.96
PHGDHO43175 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHGDHO43175 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHGDHO43175 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.02■□□□□ 0.96
PHGDHO43175 AC233992.3-201ENST00000607491 485 ntBASIC21.02■□□□□ 0.96
PHGDHO43175 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHGDHO43175 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
PHGDHO43175 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHGDHO43175 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.02■□□□□ 0.96
PHGDHO43175 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PHGDHO43175 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHGDHO43175 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PHGDHO43175 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHGDHO43175 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.01■□□□□ 0.95
PHGDHO43175 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHGDHO43175 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHGDHO43175 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.01■□□□□ 0.95
PHGDHO43175 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms