Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.3■■□□□ 1
MID1O15344 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MID1O15344 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MID1O15344 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MID1O15344 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
MID1O15344 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
MID1O15344 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.29■■□□□ 1
MID1O15344 TSPY6P-201ENST00000448518 926 ntBASIC21.29■■□□□ 1
MID1O15344 TERF1P5-201ENST00000477545 1207 ntBASIC21.29■■□□□ 1
MID1O15344 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.29■■□□□ 1
MID1O15344 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MID1O15344 AC092053.2-201ENST00000640557 1818 ntBASIC21.29■■□□□ 1
MID1O15344 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
MID1O15344 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MID1O15344 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MID1O15344 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
MID1O15344 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MID1O15344 GUSBP6-202ENST00000438529 1198 ntBASIC21.28■■□□□ 1
MID1O15344 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
MID1O15344 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.28■■□□□ 1
MID1O15344 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.28■■□□□ 1
MID1O15344 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.28■■□□□ 1
MID1O15344 AC013268.1-206ENST00000638368 961 ntBASIC21.28■■□□□ 1
MID1O15344 AC112229.1-201ENST00000639295 961 ntBASIC21.28■■□□□ 1
MID1O15344 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.28■■□□□ 1
MID1O15344 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.28■■□□□ 1
MID1O15344 AC127496.7-201ENST00000625110 1798 ntBASIC21.28■■□□□ 1
MID1O15344 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
MID1O15344 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.27■■□□□ 1
MID1O15344 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
MID1O15344 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.27■■□□□ 1
MID1O15344 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.27■■□□□ 1
MID1O15344 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.27■■□□□ 1
MID1O15344 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.27■■□□□ 1
MID1O15344 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.27■■□□□ 1
MID1O15344 AC120498.10-201ENST00000621827 505 ntBASIC21.27■■□□□ 1
MID1O15344 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 AC003102.1-202ENST00000563394 1796 ntBASIC21.27■■□□□ 1
MID1O15344 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
MID1O15344 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.27■□□□□ 0.99
MID1O15344 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MID1O15344 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MID1O15344 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MID1O15344 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MID1O15344 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.26■□□□□ 0.99
MID1O15344 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.26■□□□□ 0.99
MID1O15344 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MID1O15344 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.26■□□□□ 0.99
MID1O15344 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.26■□□□□ 0.99
MID1O15344 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MID1O15344 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.25■□□□□ 0.99
MID1O15344 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.25■□□□□ 0.99
MID1O15344 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
MID1O15344 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MID1O15344 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 POU5F1P4-201ENST00000413175 1085 ntBASIC21.25■□□□□ 0.99
MID1O15344 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
MID1O15344 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.25■□□□□ 0.99
MID1O15344 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
MID1O15344 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.25■□□□□ 0.99
MID1O15344 AC142086.2-201ENST00000569753 217 ntBASIC21.25■□□□□ 0.99
MID1O15344 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MID1O15344 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MID1O15344 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MID1O15344 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MID1O15344 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MID1O15344 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 AF201337.1-201ENST00000520239 748 ntBASIC21.24■□□□□ 0.99
MID1O15344 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.24■□□□□ 0.99
MID1O15344 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MID1O15344 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
MID1O15344 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.24■□□□□ 0.99
MID1O15344 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MID1O15344 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
MID1O15344 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
MID1O15344 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.23■□□□□ 0.99
MID1O15344 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
MID1O15344 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MID1O15344 AC068338.2-201ENST00000563278 1430 ntBASIC21.23■□□□□ 0.99
MID1O15344 SLC29A4P1-201ENST00000398760 971 ntBASIC21.23■□□□□ 0.99
MID1O15344 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.23■□□□□ 0.99
MID1O15344 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.23■□□□□ 0.99
MID1O15344 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms