Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COPEO14579 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.17■□□□□ 0.98
COPEO14579 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.17■□□□□ 0.98
COPEO14579 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.17■□□□□ 0.98
COPEO14579 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COPEO14579 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
COPEO14579 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPEO14579 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COPEO14579 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.16■□□□□ 0.98
COPEO14579 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPEO14579 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.16■□□□□ 0.98
COPEO14579 AC010141.3-201ENST00000456659 717 ntBASIC21.16■□□□□ 0.98
COPEO14579 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.16■□□□□ 0.98
COPEO14579 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COPEO14579 AC099791.2-201ENST00000605725 427 ntBASIC21.16■□□□□ 0.98
COPEO14579 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COPEO14579 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPEO14579 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
COPEO14579 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.15■□□□□ 0.98
COPEO14579 OR2I1P-207ENST00000453522 948 ntBASIC21.15■□□□□ 0.98
COPEO14579 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.15■□□□□ 0.98
COPEO14579 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.15■□□□□ 0.98
COPEO14579 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
COPEO14579 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPEO14579 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPEO14579 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.15■□□□□ 0.98
COPEO14579 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COPEO14579 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPEO14579 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.14■□□□□ 0.98
COPEO14579 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.14■□□□□ 0.98
COPEO14579 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPEO14579 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPEO14579 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 UNC93B8-201ENST00000511903 705 ntBASIC21.14■□□□□ 0.97
COPEO14579 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.14■□□□□ 0.97
COPEO14579 AL034346.1-201ENST00000568244 1277 ntBASIC21.14■□□□□ 0.97
COPEO14579 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COPEO14579 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
COPEO14579 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 FEM1AP1-201ENST00000431297 1995 ntBASIC21.14■□□□□ 0.97
COPEO14579 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPEO14579 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
COPEO14579 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.13■□□□□ 0.97
COPEO14579 AC009299.2-201ENST00000482477 511 ntBASIC21.13■□□□□ 0.97
COPEO14579 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.13■□□□□ 0.97
COPEO14579 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COPEO14579 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPEO14579 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
COPEO14579 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.12■□□□□ 0.97
COPEO14579 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.12■□□□□ 0.97
COPEO14579 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.12■□□□□ 0.97
COPEO14579 MIR3181-201ENST00000578512 73 ntBASIC21.12■□□□□ 0.97
COPEO14579 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
COPEO14579 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COPEO14579 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COPEO14579 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COPEO14579 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.11■□□□□ 0.97
COPEO14579 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms