Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC7O00311 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC7O00311 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CDC7O00311 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC7O00311 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.82■□□□□ 0.92
CDC7O00311 MIR572-201ENST00000384983 95 ntBASIC20.82■□□□□ 0.92
CDC7O00311 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.82■□□□□ 0.92
CDC7O00311 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.82■□□□□ 0.92
CDC7O00311 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDC7O00311 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC7O00311 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDC7O00311 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC7O00311 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDC7O00311 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDC7O00311 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC7O00311 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDC7O00311 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 PKD1P6-201ENST00000343738 4769 ntBASIC20.81■□□□□ 0.92
CDC7O00311 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC7O00311 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC7O00311 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC7O00311 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDC7O00311 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
CDC7O00311 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDC7O00311 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.8■□□□□ 0.92
CDC7O00311 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CDC7O00311 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.8■□□□□ 0.92
CDC7O00311 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.8■□□□□ 0.92
CDC7O00311 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC7O00311 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC7O00311 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDC7O00311 AC009237.3-201ENST00000393279 1427 ntBASIC20.79■□□□□ 0.92
CDC7O00311 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDC7O00311 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.79■□□□□ 0.92
CDC7O00311 AC055733.4-201ENST00000638462 1354 ntBASIC20.79■□□□□ 0.92
CDC7O00311 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC7O00311 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CDC7O00311 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CDC7O00311 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.78■□□□□ 0.92
CDC7O00311 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.78■□□□□ 0.92
CDC7O00311 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.78■□□□□ 0.92
CDC7O00311 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
CDC7O00311 BX005040.4-201ENST00000637145 1518 ntBASIC20.78■□□□□ 0.92
CDC7O00311 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC7O00311 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 AC005224.4-201ENST00000583262 1652 ntBASIC20.77■□□□□ 0.92
CDC7O00311 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDC7O00311 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.77■□□□□ 0.92
CDC7O00311 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDC7O00311 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDC7O00311 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.77■□□□□ 0.92
CDC7O00311 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC7O00311 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.77■□□□□ 0.91
CDC7O00311 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDC7O00311 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.76■□□□□ 0.91
CDC7O00311 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC7O00311 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC7O00311 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.76■□□□□ 0.91
CDC7O00311 AC142381.2-201ENST00000566120 298 ntBASIC20.76■□□□□ 0.91
CDC7O00311 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDC7O00311 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms