Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TNFRSF11BO00300 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TNFRSF11BO00300 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 AC010141.3-201ENST00000456659 717 ntBASIC19.57■□□□□ 0.72
TNFRSF11BO00300 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 AC099791.2-201ENST00000605725 427 ntBASIC19.57■□□□□ 0.72
TNFRSF11BO00300 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TNFRSF11BO00300 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 FEM1AP1-201ENST00000431297 1995 ntBASIC19.56■□□□□ 0.72
TNFRSF11BO00300 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 OR2I1P-207ENST00000453522 948 ntBASIC19.56■□□□□ 0.72
TNFRSF11BO00300 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TNFRSF11BO00300 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 AL034346.1-201ENST00000568244 1277 ntBASIC19.55■□□□□ 0.72
TNFRSF11BO00300 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFRSF11BO00300 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 UNC93B8-201ENST00000511903 705 ntBASIC19.54■□□□□ 0.72
TNFRSF11BO00300 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFRSF11BO00300 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.53■□□□□ 0.72
TNFRSF11BO00300 AC009299.2-201ENST00000482477 511 ntBASIC19.53■□□□□ 0.72
TNFRSF11BO00300 MIR3181-201ENST00000578512 73 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms