Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
H3BM21 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
H3BM21 AP004607.7-201ENST00000527152 1677 ntBASIC21.12■□□□□ 0.97
H3BM21 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
H3BM21 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
H3BM21 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
H3BM21 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
H3BM21 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
H3BM21 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H3BM21 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
H3BM21 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.1■□□□□ 0.97
H3BM21 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
H3BM21 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
H3BM21 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.1■□□□□ 0.97
H3BM21 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 AC092053.2-201ENST00000640557 1818 ntBASIC21.1■□□□□ 0.97
H3BM21 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.1■□□□□ 0.97
H3BM21 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3BM21 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.09■□□□□ 0.97
H3BM21 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H3BM21 AC055733.4-201ENST00000638462 1354 ntBASIC21.09■□□□□ 0.97
H3BM21 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.09■□□□□ 0.97
H3BM21 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
H3BM21 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.09■□□□□ 0.97
H3BM21 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.08■□□□□ 0.97
H3BM21 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
H3BM21 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H3BM21 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H3BM21 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.08■□□□□ 0.97
H3BM21 MIR663A-201ENST00000385250 93 ntBASIC21.08■□□□□ 0.97
H3BM21 CROCCP5-201ENST00000436658 830 ntBASIC21.08■□□□□ 0.97
H3BM21 MFSD11-216ENST00000590393 1141 ntBASIC21.08■□□□□ 0.97
H3BM21 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
H3BM21 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.08■□□□□ 0.96
H3BM21 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H3BM21 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H3BM21 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H3BM21 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H3BM21 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
H3BM21 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.07■□□□□ 0.96
H3BM21 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
H3BM21 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.07■□□□□ 0.96
H3BM21 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.07■□□□□ 0.96
H3BM21 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 AP001160.3-201ENST00000601484 763 ntBASIC21.07■□□□□ 0.96
H3BM21 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H3BM21 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
H3BM21 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3BM21 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.06■□□□□ 0.96
H3BM21 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.06■□□□□ 0.96
H3BM21 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
H3BM21 UBE2DNL-204ENST00000602536 740 ntBASIC21.06■□□□□ 0.96
H3BM21 AL109923.1-201ENST00000618799 583 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms