Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 FAM99A-202ENST00000538190 1989 ntBASIC15.35■□□□□ 0.05
SMIM9A6NGZ8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SMIM9A6NGZ8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.33■□□□□ 0.05
SMIM9A6NGZ8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 C11orf96-202ENST00000528572 1834 ntBASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
SMIM9A6NGZ8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 EEF1DP3-203ENST00000566025 782 ntBASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 AP004607.4-201ENST00000530158 1459 ntBASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMIM9A6NGZ8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 KRT18P5-201ENST00000436075 1291 ntBASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 AL162430.1-201ENST00000480705 870 ntBASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 AC138907.5-202ENST00000569484 235 ntBASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.31■□□□□ 0.04
SMIM9A6NGZ8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms