Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR4A6H8M9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR4A6H8M9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR4A6H8M9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDHR4A6H8M9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CDHR4A6H8M9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 MIR572-201ENST00000384983 95 ntBASIC19.5■□□□□ 0.71
CDHR4A6H8M9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.5■□□□□ 0.71
CDHR4A6H8M9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDHR4A6H8M9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDHR4A6H8M9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 BX005040.4-201ENST00000637145 1518 ntBASIC19.47■□□□□ 0.71
CDHR4A6H8M9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 AF106564.1-201ENST00000607058 2553 ntBASIC19.47■□□□□ 0.71
CDHR4A6H8M9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
CDHR4A6H8M9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 AC055733.4-201ENST00000638462 1354 ntBASIC19.46■□□□□ 0.71
CDHR4A6H8M9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDHR4A6H8M9 AC005224.4-201ENST00000583262 1652 ntBASIC19.46■□□□□ 0.71
CDHR4A6H8M9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDHR4A6H8M9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDHR4A6H8M9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDHR4A6H8M9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDHR4A6H8M9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.45■□□□□ 0.7
CDHR4A6H8M9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms