Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUXBA0A1W2PPF3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
DUXBA0A1W2PPF3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUXBA0A1W2PPF3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 Z92544.1-202ENST00000571933 1220 ntBASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 KRT8P33-201ENST00000508125 1423 ntBASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 AP005212.1-201ENST00000581547 1997 ntBASIC17.28■□□□□ 0.36
DUXBA0A1W2PPF3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 AC006128.1-201ENST00000624704 1661 ntBASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 AL451085.2-201ENST00000605085 799 ntBASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.27■□□□□ 0.36
DUXBA0A1W2PPF3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.27■□□□□ 0.35
DUXBA0A1W2PPF3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
DUXBA0A1W2PPF3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DUXBA0A1W2PPF3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms