Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRDV1A0A1B0GX56 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRDV1A0A1B0GX56 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TRDV1A0A1B0GX56 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.64■□□□□ 0.58
TRDV1A0A1B0GX56 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRDV1A0A1B0GX56 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRDV1A0A1B0GX56 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.63■□□□□ 0.57
TRDV1A0A1B0GX56 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 AC004987.1-201ENST00000428627 508 ntBASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 ATP5G2P3-201ENST00000429083 425 ntBASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRDV1A0A1B0GX56 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 NTF6A-201ENST00000591175 560 ntBASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms