Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 AL139246.5-201ENST00000606645 996 ntBASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-4A0A1B0GX49 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-4A0A1B0GX49 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.96□□□□□ -0.02
TRBV6-4A0A1B0GX49 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-4A0A1B0GX49 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-4A0A1B0GX49 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.96□□□□□ -0.02
TRBV6-4A0A1B0GX49 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL136967.2-201ENST00000623968 743 ntBASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 BX005040.4-201ENST00000637145 1518 ntBASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-4A0A1B0GX49 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL137060.1-201ENST00000618151 2648 ntBASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL031432.3-201ENST00000607698 485 ntBASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-4A0A1B0GX49 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 FEM1AP4-201ENST00000443167 1987 ntBASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC005224.4-201ENST00000583262 1652 ntBASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV6-4A0A1B0GX49 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms