Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L2-201ENST00000561772 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L6-201ENST00000626483 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L1-201ENST00000627662 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L8-201ENST00000629013 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L3-201ENST00000630187 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L7-201ENST00000630678 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUX4L5-201ENST00000630834 1275 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 Z98882.1-201ENST00000622160 2253 ntBASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-4A0A0C4DH59 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-4A0A0C4DH59 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 RARRES2P6-201ENST00000567333 442 ntBASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC087623.3-201ENST00000607047 1098 ntBASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRBV5-4A0A0C4DH59 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRBV5-4A0A0C4DH59 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-4A0A0C4DH59 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 KRT18P61-201ENST00000585825 1298 ntBASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 AP004607.4-201ENST00000530158 1459 ntBASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRBV5-4A0A0C4DH59 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRBV5-4A0A0C4DH59 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-4A0A0C4DH59 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-4A0A0C4DH59 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-4A0A0C4DH59 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-4A0A0C4DH59 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms