Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV3A0A0B4J244 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV3A0A0B4J244 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV3A0A0B4J244 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 AP006587.3-201ENST00000525742 1516 ntBASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 MIR4767-201ENST00000582827 78 ntBASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV3A0A0B4J244 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 UNC93B3-201ENST00000308076 687 ntBASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 SMUG1P1-201ENST00000590640 811 ntBASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV3A0A0B4J244 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV3A0A0B4J244 AC073130.3-201ENST00000624389 2278 ntBASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV3A0A0B4J244 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms