Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AP001330.3-201ENST00000520123 633 ntBASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC027682.1-201ENST00000562846 899 ntBASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC133561.4-201ENST00000566112 224 ntBASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AF213884.3-201ENST00000563833 479 ntBASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGHV3-43A0A0B4J1X8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AC003102.1-202ENST00000563394 1796 ntBASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
IGHV3-43A0A0B4J1X8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 EDA-201ENST00000338901 1233 ntBASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AL355001.2-201ENST00000620617 1191 ntBASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.56■□□□□ 0.4
IGHV3-43A0A0B4J1X8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 AP006587.3-201ENST00000525742 1516 ntBASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.55■□□□□ 0.4
IGHV3-43A0A0B4J1X8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms