Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ANKRD26P1-201ENST00000566201 3921 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 Z94160.1-201ENST00000445088 1965 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 PIFO-202ENST00000369738 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 EIF4E2-203ENST00000409167 1372 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 SLC22A16-201ENST00000330550 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 MAGEB1-203ENST00000397550 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 LINC00222-207ENST00000448744 1751 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 PARM1-202ENST00000513238 4308 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 FAM153A-202ENST00000393518 1138 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 OR7E89P-201ENST00000411729 822 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC012074.1-202ENST00000431557 419 ntTSL 3 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 RARRES3-203ENST00000439013 938 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 OR7E90P-201ENST00000454836 1029 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ST3GAL5-AS1-201ENST00000455121 783 ntTSL 3 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AL606534.5-201ENST00000517560 1243 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 C12orf73-205ENST00000547945 463 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 OAZ2-205ENST00000559753 785 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC100827.1-201ENST00000569853 382 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 MIR4517-201ENST00000578855 79 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 MIA-203ENST00000594436 507 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 HNRNPMP2-201ENST00000596369 599 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC011467.6-201ENST00000603174 320 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 LINC00893-212ENST00000609161 524 ntTSL 4 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 FAM153B-221ENST00000611539 1050 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC007786.2-201ENST00000618791 803 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 FAM153C-213ENST00000620373 1048 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC005086.3-201ENST00000624984 219 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 CDK10-222ENST00000625631 140 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 Z82186.1-201ENST00000434707 4364 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 DPY19L2P3-201ENST00000414296 2326 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 AC011479.3-201ENST00000594299 1890 ntBASIC10.3□□□□□ -0.76
NPIPA3F8WFD2 UTP14A-202ENST00000425117 2403 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ELF5-202ENST00000312319 2450 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 KLHL1-201ENST00000377844 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 GAREM1-202ENST00000399218 7033 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 PTCH2-203ENST00000447098 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ACTG2-202ENST00000409624 2064 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TREM1-201ENST00000244709 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 HAP1-201ENST00000310778 4087 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ATP6V1E2-201ENST00000306448 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ZNF543-201ENST00000321545 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 CMTM2-201ENST00000268595 1054 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 MIR200B-201ENST00000384997 95 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 LRTOMT-205ENST00000423494 1270 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 FAM86DP-202ENST00000477247 995 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 STMN4-206ENST00000522908 1004 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC136475.5-201ENST00000534483 827 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC034102.6-202ENST00000549438 882 ntTSL 3 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 DNM1P28-201ENST00000565702 474 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC124254.1-201ENST00000583629 562 ntTSL 4 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 MIR4673-201ENST00000584777 59 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC008738.2-201ENST00000593041 404 ntTSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 638.6 ms