Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC35.89■■■■□ 3.34
BIVM-ERCC5R4GMW8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC35.88■■■■□ 3.34
BIVM-ERCC5R4GMW8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 DUSP5P2-201ENST00000426873 1033 ntBASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
BIVM-ERCC5R4GMW8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 AC010980.2-201ENST00000587099 1412 ntBASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 AC091874.3-201ENST00000512672 1195 ntBASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 ADM-205ENST00000528544 586 ntTSL 2 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC35.87■■■■□ 3.33
BIVM-ERCC5R4GMW8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC35.86■■■■□ 3.33
BIVM-ERCC5R4GMW8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 POU5F1P4-201ENST00000413175 1085 ntBASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 AC008175.2-201ENST00000612840 297 ntBASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
BIVM-ERCC5R4GMW8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
BIVM-ERCC5R4GMW8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC35.83■■■■□ 3.33
BIVM-ERCC5R4GMW8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC35.82■■■■□ 3.33
BIVM-ERCC5R4GMW8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC139530.1-201ENST00000575312 1977 ntBASIC35.82■■■■□ 3.32
BIVM-ERCC5R4GMW8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
BIVM-ERCC5R4GMW8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
BIVM-ERCC5R4GMW8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
BIVM-ERCC5R4GMW8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC35.81■■■■□ 3.32
BIVM-ERCC5R4GMW8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC35.81■■■■□ 3.32
BIVM-ERCC5R4GMW8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
BIVM-ERCC5R4GMW8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
BIVM-ERCC5R4GMW8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC35.78■■■■□ 3.32
BIVM-ERCC5R4GMW8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC061975.6-201ENST00000579045 1553 ntBASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 GCSHP5-201ENST00000443090 522 ntBASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC120498.10-201ENST00000621827 505 ntBASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC35.76■■■■□ 3.32
BIVM-ERCC5R4GMW8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
BIVM-ERCC5R4GMW8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms