Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX49Q9Y6V7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX49Q9Y6V7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.39■■□□□ 1.65
DDX49Q9Y6V7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX49Q9Y6V7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX49Q9Y6V7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX49Q9Y6V7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 IGHV3-19-201ENST00000521488 291 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L2-201ENST00000561772 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L6-201ENST00000626483 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L1-201ENST00000627662 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L8-201ENST00000629013 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L3-201ENST00000630187 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L7-201ENST00000630678 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DUX4L5-201ENST00000630834 1275 ntBASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX49Q9Y6V7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
DDX49Q9Y6V7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 DUX4L4-201ENST00000566884 1269 ntBASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 AC144652.1-201ENST00000609974 1624 ntBASIC25.33■■□□□ 1.65
DDX49Q9Y6V7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
DDX49Q9Y6V7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
DDX49Q9Y6V7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms