Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 AC096631.2-201ENST00000436136 790 ntBASIC20.03■□□□□ 0.8
GPC6Q9Y625 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC6Q9Y625 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC6Q9Y625 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 AL136162.1-201ENST00000607711 1078 ntBASIC20.02■□□□□ 0.8
GPC6Q9Y625 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC6Q9Y625 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GPC6Q9Y625 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC6Q9Y625 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC6Q9Y625 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.02■□□□□ 0.79
GPC6Q9Y625 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.02■□□□□ 0.79
GPC6Q9Y625 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC6Q9Y625 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC6Q9Y625 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC6Q9Y625 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC6Q9Y625 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC6Q9Y625 AC135279.3-201ENST00000610945 1311 ntBASIC20.01■□□□□ 0.79
GPC6Q9Y625 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC6Q9Y625 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
GPC6Q9Y625 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC6Q9Y625 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
GPC6Q9Y625 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20■□□□□ 0.79
GPC6Q9Y625 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20■□□□□ 0.79
GPC6Q9Y625 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20■□□□□ 0.79
GPC6Q9Y625 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20■□□□□ 0.79
GPC6Q9Y625 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GPC6Q9Y625 OR7E47P-201ENST00000546390 1422 ntBASIC20■□□□□ 0.79
GPC6Q9Y625 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20■□□□□ 0.79
GPC6Q9Y625 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20■□□□□ 0.79
GPC6Q9Y625 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20■□□□□ 0.79
GPC6Q9Y625 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC6Q9Y625 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
GPC6Q9Y625 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20■□□□□ 0.79
GPC6Q9Y625 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GPC6Q9Y625 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.99■□□□□ 0.79
GPC6Q9Y625 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC6Q9Y625 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC6Q9Y625 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
GPC6Q9Y625 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GPC6Q9Y625 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms