Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHGA1Q9Y5H4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGA1Q9Y5H4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PCDHGA1Q9Y5H4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 AP006587.3-201ENST00000525742 1516 ntBASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA1Q9Y5H4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA1Q9Y5H4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 AC091874.3-201ENST00000512672 1195 ntBASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA1Q9Y5H4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA1Q9Y5H4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 AL591742.1-201ENST00000604433 565 ntBASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA1Q9Y5H4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA1Q9Y5H4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA1Q9Y5H4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA1Q9Y5H4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA1Q9Y5H4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms