Protein–RNA interactions for Protein: Q9Y5F8

PCDHGB7, Protocadherin gamma-B7, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7Q9Y5F8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 NCF1B-203ENST00000435988 1254 ntBASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 AC079140.4-201ENST00000507448 529 ntBASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 AC011767.1-201ENST00000617410 1153 ntBASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 AL109923.1-201ENST00000618799 583 ntBASIC20.08■□□□□ 0.81
PCDHGB7Q9Y5F8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB7Q9Y5F8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHGB7Q9Y5F8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 ESRRAP2-201ENST00000418437 1549 ntBASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 AC004687.1-201ENST00000579003 1625 ntBASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 ECEL1P1-201ENST00000373592 1742 ntBASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGB7Q9Y5F8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 CROCCP5-201ENST00000436658 830 ntBASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB7Q9Y5F8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB7Q9Y5F8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB7Q9Y5F8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 AC007375.3-201ENST00000600936 2314 ntBASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 GPX1P1-201ENST00000388829 606 ntBASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB7Q9Y5F8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB7Q9Y5F8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGB7Q9Y5F8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms