Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPRKBQ9Y3C4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.7
TPRKBQ9Y3C4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TPRKBQ9Y3C4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.39■□□□□ 0.7
TPRKBQ9Y3C4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 AC026471.6-201ENST00000622954 1905 ntBASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPRKBQ9Y3C4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 RNF126P1-201ENST00000567452 1320 ntBASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.38■□□□□ 0.69
TPRKBQ9Y3C4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 SNX5-217ENST00000606557 1087 ntBASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPRKBQ9Y3C4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 AC139795.1-202ENST00000500444 432 ntBASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPRKBQ9Y3C4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 AC129492.7-201ENST00000622992 756 ntBASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPRKBQ9Y3C4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 AP005212.1-201ENST00000581547 1997 ntBASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TPRKBQ9Y3C4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms