Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 AC103834.1-201ENST00000520383 144 ntBASIC18.91■□□□□ 0.62
LSM2Q9Y333 NTF6A-201ENST00000591175 560 ntBASIC18.91■□□□□ 0.62
LSM2Q9Y333 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM2Q9Y333 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.9■□□□□ 0.62
LSM2Q9Y333 AC006128.1-201ENST00000624704 1661 ntBASIC18.9■□□□□ 0.62
LSM2Q9Y333 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.9■□□□□ 0.62
LSM2Q9Y333 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LSM2Q9Y333 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.9■□□□□ 0.62
LSM2Q9Y333 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM2Q9Y333 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM2Q9Y333 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM2Q9Y333 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM2Q9Y333 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.89■□□□□ 0.62
LSM2Q9Y333 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM2Q9Y333 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM2Q9Y333 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LSM2Q9Y333 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM2Q9Y333 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.89■□□□□ 0.61
LSM2Q9Y333 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.89■□□□□ 0.61
LSM2Q9Y333 AC103724.3-201ENST00000564481 992 ntBASIC18.89■□□□□ 0.61
LSM2Q9Y333 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 AC021242.3-201ENST00000607598 1377 ntBASIC18.89■□□□□ 0.61
LSM2Q9Y333 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
LSM2Q9Y333 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM2Q9Y333 AFG3L1P-217ENST00000557444 2447 ntBASIC18.89■□□□□ 0.61
LSM2Q9Y333 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LSM2Q9Y333 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM2Q9Y333 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM2Q9Y333 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSM2Q9Y333 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 HSD17B1P1-201ENST00000590052 955 ntBASIC18.87■□□□□ 0.61
LSM2Q9Y333 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 AL391422.3-201ENST00000603791 2761 ntBASIC18.87■□□□□ 0.61
LSM2Q9Y333 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
LSM2Q9Y333 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LSM2Q9Y333 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LSM2Q9Y333 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LSM2Q9Y333 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM2Q9Y333 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms