Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC15.02□□□□□ -0.018e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)14.95□□□□□ -0.028e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.078e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-212ENST00000560467 928 ntTSL 313.67□□□□□ -0.228e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.228e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.438e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-211ENST00000560173 389 ntTSL 311.14□□□□□ -0.638e-10■□□□□ 8.4
DDX52Q9Y2R4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.934e-66■□□□□ 8.3
DDX52Q9Y2R4 RPL37-202ENST00000504562 505 ntTSL 213.48□□□□□ -0.255e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-205ENST00000509877 637 ntTSL 5 BASIC9.36□□□□□ -0.915e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-203ENST00000507642 425 ntTSL 38.68□□□□□ -1.025e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.315e-12■□□□□ 8.3
DDX52Q9Y2R4 RPS12-202ENST00000484616 639 ntTSL 23.83□□□□□ -1.84e-66■□□□□ 8.3
DDX52Q9Y2R4 SNORD72-201ENST00000390994 80 ntBASIC1.47□□□□□ -2.175e-12■□□□□ 8.3
DDX52Q9Y2R4 SNORD101-201ENST00000384027 73 ntBASIC0.1□□□□□ -2.394e-66■□□□□ 8.3
DDX52Q9Y2R4 RPL27-203ENST00000587478 584 ntTSL 225.47■■□□□ 1.674e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-208ENST00000593262 1872 ntTSL 221.53■■□□□ 1.044e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.814e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-201ENST00000167825 3018 ntTSL 215.38■□□□□ 0.054e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.074e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-206ENST00000469726 4585 ntTSL 213.89□□□□□ -0.194e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.93□□□□□ -0.344e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.474e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.574e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-204ENST00000588830 318 ntTSL 29.39□□□□□ -0.914e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.914e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-202ENST00000586277 460 ntTSL 39.16□□□□□ -0.944e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-208ENST00000580755 412 ntTSL 218.92■□□□□ 0.621e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.71■□□□□ 0.431e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-217ENST00000591981 565 ntTSL 417.44■□□□□ 0.384e-6■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-214ENST00000590448 604 ntTSL 215.06■□□□□ 04e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC13.2□□□□□ -0.31e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-219ENST00000592989 553 ntTSL 512.52□□□□□ -0.414e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-202ENST00000394935 580 ntTSL 311.62□□□□□ -0.551e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC9.23□□□□□ -0.931e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-203ENST00000585650 520 ntTSL 57.59□□□□□ -1.194e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-201ENST00000355731 587 ntTSL 57.34□□□□□ -1.231e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-207ENST00000578181 593 ntTSL 23.89□□□□□ -1.791e-10■□□□□ 8.3
DDX52Q9Y2R4 SNORD42A-201ENST00000459584 64 ntBASIC3.71□□□□□ -1.821e-10■□□□□ 8.3
DDX52Q9Y2R4 SMG1P3-205ENST00000522480 4262 ntBASIC12.78□□□□□ -0.361e-9■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-202ENST00000553547 2274 ntTSL 28.43□□□□□ -1.062e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.04□□□□□ -1.282e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.25□□□□□ -1.412e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.772e-11■□□□□ 8.3
DDX52Q9Y2R4 HIST1H3D-203ENST00000635641 1637 ntTSL 521.19■□□□□ 0.986e-7■□□□□ 8.2
DDX52Q9Y2R4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.92■□□□□ 0.786e-7■□□□□ 8.2
DDX52Q9Y2R4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.66e-7■□□□□ 8.2
DDX52Q9Y2R4 NFATC3-209ENST00000561714 792 ntTSL 326.66■■□□□ 1.862e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-210ENST00000562171 707 ntTSL 324.98■■□□□ 1.592e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-219ENST00000568466 737 ntTSL 224.53■■□□□ 1.522e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-206ENST00000539828 2484 ntTSL 219.48■□□□□ 0.712e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.21■□□□□ 0.512e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-202ENST00000359944 1054 ntTSL 1 (best)17.42■□□□□ 0.382e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-203ENST00000468210 824 ntTSL 217.31■□□□□ 0.362e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.99■□□□□ 0.312e-6■□□□□ 8.1
DDX52Q9Y2R4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.12■□□□□ 0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.16■□□□□ 0.022e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-217ENST00000566893 715 ntTSL 214.64□□□□□ -0.072e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC14.01□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-210ENST00000482604 671 ntTSL 514.01□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.97□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-209ENST00000480374 729 ntTSL 313.73□□□□□ -0.212e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-211ENST00000488002 842 ntTSL 213.42□□□□□ -0.262e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC13.14□□□□□ -0.312e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.342e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-208ENST00000477177 562 ntTSL 312.56□□□□□ -0.42e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)10.84□□□□□ -0.672e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-208ENST00000553077 3870 ntTSL 210.59□□□□□ -0.712e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC10.54□□□□□ -0.722e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-204ENST00000379165 3583 ntTSL 210.44□□□□□ -0.742e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-215ENST00000496904 175 ntTSL 510.04□□□□□ -0.82e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)8.87□□□□□ -0.992e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-207ENST00000549350 3588 ntTSL 28.15□□□□□ -1.112e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-212ENST00000563288 3790 ntTSL 1 (best)7.17□□□□□ -1.262e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)6.95□□□□□ -1.32e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-205ENST00000535127 4194 ntTSL 1 (best)6.79□□□□□ -1.322e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)6.67□□□□□ -1.342e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)6.56□□□□□ -1.362e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-218ENST00000567152 3186 ntTSL 1 (best)5.99□□□□□ -1.452e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-214ENST00000563796 3753 ntTSL 1 (best)5.44□□□□□ -1.542e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-206ENST00000473500 689 ntTSL 33.59□□□□□ -1.832e-6■□□□□ 8.1
Retrieved 83 of 4,483 protein–RNA pairs in 17.5 ms