Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC15.02□□□□□ -0.018e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)14.95□□□□□ -0.028e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.078e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-212ENST00000560467 928 ntTSL 313.67□□□□□ -0.228e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.228e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.438e-10■□□□□ 8.4
DDX52Q9Y2R4 LDLR-211ENST00000560173 389 ntTSL 311.14□□□□□ -0.638e-10■□□□□ 8.4
DDX52Q9Y2R4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.934e-66■□□□□ 8.3
DDX52Q9Y2R4 RPL37-202ENST00000504562 505 ntTSL 213.48□□□□□ -0.255e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-205ENST00000509877 637 ntTSL 5 BASIC9.36□□□□□ -0.915e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-203ENST00000507642 425 ntTSL 38.68□□□□□ -1.025e-12■□□□□ 8.3
DDX52Q9Y2R4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.315e-12■□□□□ 8.3
DDX52Q9Y2R4 RPS12-202ENST00000484616 639 ntTSL 23.83□□□□□ -1.84e-66■□□□□ 8.3
DDX52Q9Y2R4 SNORD72-201ENST00000390994 80 ntBASIC1.47□□□□□ -2.175e-12■□□□□ 8.3
DDX52Q9Y2R4 SNORD101-201ENST00000384027 73 ntBASIC0.1□□□□□ -2.394e-66■□□□□ 8.3
DDX52Q9Y2R4 RPL27-203ENST00000587478 584 ntTSL 225.47■■□□□ 1.674e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-208ENST00000593262 1872 ntTSL 221.53■■□□□ 1.044e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.814e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-201ENST00000167825 3018 ntTSL 215.38■□□□□ 0.054e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.074e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-206ENST00000469726 4585 ntTSL 213.89□□□□□ -0.194e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.93□□□□□ -0.344e-6■□□□□ 8.3
DDX52Q9Y2R4 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.474e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.574e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-204ENST00000588830 318 ntTSL 29.39□□□□□ -0.914e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.914e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL27-202ENST00000586277 460 ntTSL 39.16□□□□□ -0.944e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-208ENST00000580755 412 ntTSL 218.92■□□□□ 0.621e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.71■□□□□ 0.431e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-217ENST00000591981 565 ntTSL 417.44■□□□□ 0.384e-6■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-214ENST00000590448 604 ntTSL 215.06■□□□□ 04e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC13.2□□□□□ -0.31e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-219ENST00000592989 553 ntTSL 512.52□□□□□ -0.414e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-202ENST00000394935 580 ntTSL 311.62□□□□□ -0.551e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC9.23□□□□□ -0.931e-10■□□□□ 8.3
DDX52Q9Y2R4 ATP5A1-203ENST00000585650 520 ntTSL 57.59□□□□□ -1.194e-6■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-201ENST00000355731 587 ntTSL 57.34□□□□□ -1.231e-10■□□□□ 8.3
DDX52Q9Y2R4 RPL23A-207ENST00000578181 593 ntTSL 23.89□□□□□ -1.791e-10■□□□□ 8.3
DDX52Q9Y2R4 SNORD42A-201ENST00000459584 64 ntBASIC3.71□□□□□ -1.821e-10■□□□□ 8.3
DDX52Q9Y2R4 SMG1P3-205ENST00000522480 4262 ntBASIC12.78□□□□□ -0.361e-9■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-202ENST00000553547 2274 ntTSL 28.43□□□□□ -1.062e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.04□□□□□ -1.282e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.25□□□□□ -1.412e-11■□□□□ 8.3
DDX52Q9Y2R4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.772e-11■□□□□ 8.3
DDX52Q9Y2R4 HIST1H3D-203ENST00000635641 1637 ntTSL 521.19■□□□□ 0.986e-7■□□□□ 8.2
DDX52Q9Y2R4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.92■□□□□ 0.786e-7■□□□□ 8.2
DDX52Q9Y2R4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.66e-7■□□□□ 8.2
DDX52Q9Y2R4 NFATC3-209ENST00000561714 792 ntTSL 326.66■■□□□ 1.862e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-210ENST00000562171 707 ntTSL 324.98■■□□□ 1.592e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-219ENST00000568466 737 ntTSL 224.53■■□□□ 1.522e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-206ENST00000539828 2484 ntTSL 219.48■□□□□ 0.712e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.21■□□□□ 0.512e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-202ENST00000359944 1054 ntTSL 1 (best)17.42■□□□□ 0.382e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-203ENST00000468210 824 ntTSL 217.31■□□□□ 0.362e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.99■□□□□ 0.312e-6■□□□□ 8.1
DDX52Q9Y2R4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.12■□□□□ 0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.16■□□□□ 0.022e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-217ENST00000566893 715 ntTSL 214.64□□□□□ -0.072e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-205ENST00000472629 744 ntTSL 3 BASIC14.01□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-210ENST00000482604 671 ntTSL 514.01□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.97□□□□□ -0.172e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-209ENST00000480374 729 ntTSL 313.73□□□□□ -0.212e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-211ENST00000488002 842 ntTSL 213.42□□□□□ -0.262e-6■□□□□ 8.1
DDX52Q9Y2R4 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC13.14□□□□□ -0.312e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.342e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-208ENST00000477177 562 ntTSL 312.56□□□□□ -0.42e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)10.84□□□□□ -0.672e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-208ENST00000553077 3870 ntTSL 210.59□□□□□ -0.712e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC10.54□□□□□ -0.722e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-204ENST00000379165 3583 ntTSL 210.44□□□□□ -0.742e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-215ENST00000496904 175 ntTSL 510.04□□□□□ -0.82e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)8.87□□□□□ -0.992e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-207ENST00000549350 3588 ntTSL 28.15□□□□□ -1.112e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-212ENST00000563288 3790 ntTSL 1 (best)7.17□□□□□ -1.262e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)6.95□□□□□ -1.32e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-205ENST00000535127 4194 ntTSL 1 (best)6.79□□□□□ -1.322e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)6.67□□□□□ -1.342e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)6.56□□□□□ -1.362e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-218ENST00000567152 3186 ntTSL 1 (best)5.99□□□□□ -1.452e-6■□□□□ 8.1
DDX52Q9Y2R4 NFATC3-214ENST00000563796 3753 ntTSL 1 (best)5.44□□□□□ -1.542e-6■□□□□ 8.1
DDX52Q9Y2R4 NDUFB5-206ENST00000473500 689 ntTSL 33.59□□□□□ -1.832e-6■□□□□ 8.1
Retrieved 83 of 4,483 protein–RNA pairs in 25.4 ms