Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2B3Q9UQQ2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2B3Q9UQQ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2B3Q9UQQ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2B3Q9UQQ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 YBX1P1-201ENST00000445822 960 ntBASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2B3Q9UQQ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2B3Q9UQQ2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.52■□□□□ 0.87
SH2B3Q9UQQ2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH2B3Q9UQQ2 AC007375.3-201ENST00000600936 2314 ntBASIC20.52■□□□□ 0.87
SH2B3Q9UQQ2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2B3Q9UQQ2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 CCDC92B-201ENST00000575506 885 ntBASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2B3Q9UQQ2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms