Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 POU5F1P4-201ENST00000413175 1085 ntBASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 AL162412.1-201ENST00000567129 965 ntBASIC31.96■■■□□ 2.71
SHANK2Q9UPX8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
SHANK2Q9UPX8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SHANK2Q9UPX8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SHANK2Q9UPX8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SHANK2Q9UPX8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
SHANK2Q9UPX8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SHANK2Q9UPX8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.95■■■□□ 2.7
SHANK2Q9UPX8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SHANK2Q9UPX8 AC243732.1-201ENST00000612648 864 ntBASIC31.95■■■□□ 2.7
SHANK2Q9UPX8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SHANK2Q9UPX8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 AC008175.2-201ENST00000612840 297 ntBASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SHANK2Q9UPX8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 AC093787.1-201ENST00000450396 207 ntBASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 AC092118.2-201ENST00000613495 667 ntBASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
SHANK2Q9UPX8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 AC016405.3-201ENST00000607710 860 ntBASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 AC133041.1-202ENST00000642053 222 ntBASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC31.92■■■□□ 2.7
SHANK2Q9UPX8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 MKRN4P-201ENST00000444706 1521 ntBASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 FAM201B-201ENST00000458407 597 ntBASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.91■■■□□ 2.7
SHANK2Q9UPX8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
SHANK2Q9UPX8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.89■■■□□ 2.7
SHANK2Q9UPX8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SHANK2Q9UPX8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.69
SHANK2Q9UPX8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SHANK2Q9UPX8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC31.89■■■□□ 2.69
SHANK2Q9UPX8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 AC120498.10-201ENST00000621827 505 ntBASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 AC127496.7-201ENST00000625110 1798 ntBASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SHANK2Q9UPX8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 MIPEPP3-201ENST00000412105 444 ntBASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 AL512625.2-201ENST00000417533 625 ntBASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
SHANK2Q9UPX8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms