Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF2Q9P2I0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF2Q9P2I0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF2Q9P2I0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 AL031602.1-201ENST00000633169 911 ntBASIC21.32■■□□□ 1
CPSF2Q9P2I0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF2Q9P2I0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CPSF2Q9P2I0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CPSF2Q9P2I0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.31■■□□□ 1
CPSF2Q9P2I0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF2Q9P2I0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.31■■□□□ 1
CPSF2Q9P2I0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.31■■□□□ 1
CPSF2Q9P2I0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 AC026471.6-201ENST00000622954 1905 ntBASIC21.3■■□□□ 1
CPSF2Q9P2I0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF2Q9P2I0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPSF2Q9P2I0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 MIR3621-201ENST00000580529 85 ntBASIC21.29■■□□□ 1
CPSF2Q9P2I0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.29■■□□□ 1
CPSF2Q9P2I0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPSF2Q9P2I0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.29■■□□□ 1
CPSF2Q9P2I0 Z98882.1-201ENST00000622160 2253 ntBASIC21.29■■□□□ 1
CPSF2Q9P2I0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CPSF2Q9P2I0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CPSF2Q9P2I0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CPSF2Q9P2I0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPSF2Q9P2I0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPSF2Q9P2I0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPSF2Q9P2I0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.27■■□□□ 1
CPSF2Q9P2I0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 AC079089.2-201ENST00000531211 1277 ntBASIC21.27■■□□□ 1
CPSF2Q9P2I0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.27■■□□□ 1
CPSF2Q9P2I0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.27■■□□□ 1
CPSF2Q9P2I0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPSF2Q9P2I0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CPSF2Q9P2I0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CPSF2Q9P2I0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CPSF2Q9P2I0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms