Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD9Q9P000 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD9Q9P000 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD9Q9P000 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD9Q9P000 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD9Q9P000 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD9Q9P000 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD9Q9P000 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD9Q9P000 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.02■□□□□ 0.47
COMMD9Q9P000 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD9Q9P000 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.02■□□□□ 0.47
COMMD9Q9P000 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD9Q9P000 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 FEM1AP4-201ENST00000443167 1987 ntBASIC18.01■□□□□ 0.47
COMMD9Q9P000 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 AC137630.3-201ENST00000607245 391 ntBASIC18.01■□□□□ 0.47
COMMD9Q9P000 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COMMD9Q9P000 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD9Q9P000 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
COMMD9Q9P000 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18■□□□□ 0.47
COMMD9Q9P000 AF106564.1-201ENST00000607058 2553 ntBASIC18■□□□□ 0.47
COMMD9Q9P000 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
COMMD9Q9P000 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18■□□□□ 0.47
COMMD9Q9P000 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18■□□□□ 0.47
COMMD9Q9P000 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18■□□□□ 0.47
COMMD9Q9P000 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18■□□□□ 0.47
COMMD9Q9P000 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COMMD9Q9P000 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD9Q9P000 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COMMD9Q9P000 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 LINC01006-201ENST00000333319 2292 ntBASIC17.99■□□□□ 0.47
COMMD9Q9P000 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 AC103834.1-201ENST00000520383 144 ntBASIC17.99■□□□□ 0.47
COMMD9Q9P000 AC103724.3-201ENST00000564481 992 ntBASIC17.99■□□□□ 0.47
COMMD9Q9P000 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.99■□□□□ 0.47
COMMD9Q9P000 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COMMD9Q9P000 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COMMD9Q9P000 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD9Q9P000 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD9Q9P000 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.98■□□□□ 0.47
COMMD9Q9P000 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms