Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MKS1Q9NXB0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKS1Q9NXB0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MKS1Q9NXB0 AL121603.2-201ENST00000557373 2117 ntBASIC21.04■□□□□ 0.96
MKS1Q9NXB0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.04■□□□□ 0.96
MKS1Q9NXB0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.03■□□□□ 0.96
MKS1Q9NXB0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MKS1Q9NXB0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MKS1Q9NXB0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.02■□□□□ 0.95
MKS1Q9NXB0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MKS1Q9NXB0 AP004607.7-201ENST00000527152 1677 ntBASIC21.01■□□□□ 0.95
MKS1Q9NXB0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 AC010525.1-201ENST00000585559 441 ntBASIC21■□□□□ 0.95
MKS1Q9NXB0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21■□□□□ 0.95
MKS1Q9NXB0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21■□□□□ 0.95
MKS1Q9NXB0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKS1Q9NXB0 AP005212.1-201ENST00000581547 1997 ntBASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKS1Q9NXB0 AC092667.1-201ENST00000434301 2586 ntBASIC20.98■□□□□ 0.95
MKS1Q9NXB0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
MKS1Q9NXB0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKS1Q9NXB0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms