Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB16Q9NRJ7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 AC104564.3-201ENST00000582367 638 ntBASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB16Q9NRJ7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 SRD5A1P1-201ENST00000442297 786 ntBASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 AL356441.2-201ENST00000443009 864 ntBASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB16Q9NRJ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 AC099791.2-201ENST00000605725 427 ntBASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB16Q9NRJ7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB16Q9NRJ7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB16Q9NRJ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB16Q9NRJ7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms