Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF304Q9HCX3 AC092053.2-201ENST00000640557 1818 ntBASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF304Q9HCX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 RARRES2P11-201ENST00000635158 484 ntBASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF304Q9HCX3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF304Q9HCX3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF304Q9HCX3 KRT18P11-201ENST00000435214 1283 ntBASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ZNF304Q9HCX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 AP001160.3-201ENST00000601484 763 ntBASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF304Q9HCX3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF304Q9HCX3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms