Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MRM3Q9HC36 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
MRM3Q9HC36 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
MRM3Q9HC36 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
MRM3Q9HC36 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.33■■□□□ 1
MRM3Q9HC36 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MRM3Q9HC36 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.32■■□□□ 1
MRM3Q9HC36 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.32■■□□□ 1
MRM3Q9HC36 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.32■■□□□ 1
MRM3Q9HC36 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.32■■□□□ 1
MRM3Q9HC36 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MRM3Q9HC36 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MRM3Q9HC36 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.31■■□□□ 1
MRM3Q9HC36 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.31■■□□□ 1
MRM3Q9HC36 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MRM3Q9HC36 AC055733.4-201ENST00000638462 1354 ntBASIC21.31■■□□□ 1
MRM3Q9HC36 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.31■■□□□ 1
MRM3Q9HC36 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.31■■□□□ 1
MRM3Q9HC36 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.31■■□□□ 1
MRM3Q9HC36 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MRM3Q9HC36 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.31■■□□□ 1
MRM3Q9HC36 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.3■■□□□ 1
MRM3Q9HC36 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.3■■□□□ 1
MRM3Q9HC36 SUDS3P1-201ENST00000505831 966 ntBASIC21.3■■□□□ 1
MRM3Q9HC36 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.3■■□□□ 1
MRM3Q9HC36 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MRM3Q9HC36 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.29■■□□□ 1
MRM3Q9HC36 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.29■■□□□ 1
MRM3Q9HC36 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.29■■□□□ 1
MRM3Q9HC36 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.29■■□□□ 1
MRM3Q9HC36 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.29■■□□□ 1
MRM3Q9HC36 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MRM3Q9HC36 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.29■■□□□ 1
MRM3Q9HC36 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
MRM3Q9HC36 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MRM3Q9HC36 BX005040.4-201ENST00000637145 1518 ntBASIC21.29■■□□□ 1
MRM3Q9HC36 AC005224.4-201ENST00000583262 1652 ntBASIC21.28■■□□□ 1
MRM3Q9HC36 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.28■■□□□ 1
MRM3Q9HC36 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.28■■□□□ 1
MRM3Q9HC36 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
MRM3Q9HC36 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.28■■□□□ 1
MRM3Q9HC36 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.27■■□□□ 1
MRM3Q9HC36 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.27■■□□□ 1
MRM3Q9HC36 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.27■■□□□ 1
MRM3Q9HC36 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.27■■□□□ 1
MRM3Q9HC36 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.27■■□□□ 1
MRM3Q9HC36 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MRM3Q9HC36 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.27■■□□□ 1
MRM3Q9HC36 AC005229.4-201ENST00000610085 2198 ntBASIC21.27■■□□□ 1
MRM3Q9HC36 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MRM3Q9HC36 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
MRM3Q9HC36 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MRM3Q9HC36 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.27■□□□□ 0.99
MRM3Q9HC36 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.26■□□□□ 0.99
MRM3Q9HC36 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms