Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 TSPY13P-201ENST00000338964 914 ntBASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 CA15P2-201ENST00000611168 834 ntBASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 MIR6722-201ENST00000617286 78 ntBASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.19□□□□□ -0.14
SND1-IT1Q9HBX3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 LINC01006-201ENST00000333319 2292 ntBASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SND1-IT1Q9HBX3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 RNF165-205ENST00000588679 2904 ntBASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.17□□□□□ -0.14
SND1-IT1Q9HBX3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 AC137630.3-201ENST00000607245 391 ntBASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SND1-IT1Q9HBX3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms