Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MINDY3Q9H8M7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.32■■□□□ 1.32
MINDY3Q9H8M7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 ID1-201ENST00000376105 1233 ntBASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 DUX4L16-201ENST00000555130 1264 ntBASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MINDY3Q9H8M7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 SLC7A5P2-201ENST00000553010 536 ntBASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MINDY3Q9H8M7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 AC233723.2-201ENST00000623798 2106 ntBASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MINDY3Q9H8M7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MINDY3Q9H8M7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 HLA-L-209ENST00000420110 1011 ntBASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 KRT18P20-201ENST00000548986 1279 ntBASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 FAM99A-202ENST00000538190 1989 ntBASIC23.27■■□□□ 1.32
MINDY3Q9H8M7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 AC010542.4-201ENST00000563151 1910 ntBASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
MINDY3Q9H8M7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 GUSBP5-202ENST00000510805 1989 ntBASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
MINDY3Q9H8M7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms