Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 AC068338.2-201ENST00000563278 1430 ntBASIC22■■□□□ 1.11
BRD9Q9H8M2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22■■□□□ 1.11
BRD9Q9H8M2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22■■□□□ 1.11
BRD9Q9H8M2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22■■□□□ 1.11
BRD9Q9H8M2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22■■□□□ 1.11
BRD9Q9H8M2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22■■□□□ 1.11
BRD9Q9H8M2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
BRD9Q9H8M2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
BRD9Q9H8M2 MKRN4P-201ENST00000444706 1521 ntBASIC22■■□□□ 1.11
BRD9Q9H8M2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
BRD9Q9H8M2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.99■■□□□ 1.11
BRD9Q9H8M2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 EEF1DP3-203ENST00000566025 782 ntBASIC21.99■■□□□ 1.11
BRD9Q9H8M2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
BRD9Q9H8M2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 MIPEPP3-201ENST00000412105 444 ntBASIC21.98■■□□□ 1.11
BRD9Q9H8M2 RNA5SP413-201ENST00000516373 109 ntBASIC21.98■■□□□ 1.11
BRD9Q9H8M2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 AC053503.5-201ENST00000601508 636 ntBASIC21.98■■□□□ 1.11
BRD9Q9H8M2 AC008694.1-202ENST00000636953 945 ntBASIC21.98■■□□□ 1.11
BRD9Q9H8M2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
BRD9Q9H8M2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BRD9Q9H8M2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 LINC00526-201ENST00000581067 1875 ntBASIC21.96■■□□□ 1.11
BRD9Q9H8M2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.96■■□□□ 1.11
BRD9Q9H8M2 AC007322.4-201ENST00000509611 723 ntBASIC21.96■■□□□ 1.11
BRD9Q9H8M2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 OR10C1-204ENST00000622521 1039 ntBASIC21.96■■□□□ 1.11
BRD9Q9H8M2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
BRD9Q9H8M2 AP006587.3-201ENST00000525742 1516 ntBASIC21.96■■□□□ 1.11
BRD9Q9H8M2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.95■■□□□ 1.1
BRD9Q9H8M2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 AC069236.1-201ENST00000604339 616 ntBASIC21.95■■□□□ 1.1
BRD9Q9H8M2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BRD9Q9H8M2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms