Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TUBB1Q9H4B7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 SLC25A24-204ENST00000569674 2357 ntBASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
TUBB1Q9H4B7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 AL049796.1-201ENST00000565336 1766 ntBASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBB1Q9H4B7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 AP006587.3-201ENST00000525742 1516 ntBASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBB1Q9H4B7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBB1Q9H4B7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TUBB1Q9H4B7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 SMUG1P1-201ENST00000590640 811 ntBASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB1Q9H4B7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
TUBB1Q9H4B7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.45■□□□□ 0.86
TUBB1Q9H4B7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB1Q9H4B7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.45■□□□□ 0.86
TUBB1Q9H4B7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms