Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.89■■□□□ 1.25
CDH23Q9H251 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.89■■□□□ 1.25
CDH23Q9H251 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
CDH23Q9H251 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDH23Q9H251 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDH23Q9H251 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.89■■□□□ 1.25
CDH23Q9H251 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.89■■□□□ 1.25
CDH23Q9H251 C1QBPP2-201ENST00000528754 825 ntBASIC22.89■■□□□ 1.25
CDH23Q9H251 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.89■■□□□ 1.25
CDH23Q9H251 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.89■■□□□ 1.25
CDH23Q9H251 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.88■■□□□ 1.25
CDH23Q9H251 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.88■■□□□ 1.25
CDH23Q9H251 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.88■■□□□ 1.25
CDH23Q9H251 RN7SL850P-201ENST00000579959 291 ntBASIC22.88■■□□□ 1.25
CDH23Q9H251 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CDH23Q9H251 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.88■■□□□ 1.25
CDH23Q9H251 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDH23Q9H251 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH23Q9H251 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.87■■□□□ 1.25
CDH23Q9H251 AC010980.2-201ENST00000587099 1412 ntBASIC22.87■■□□□ 1.25
CDH23Q9H251 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDH23Q9H251 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDH23Q9H251 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CDH23Q9H251 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.86■■□□□ 1.25
CDH23Q9H251 C2orf69P4-201ENST00000565394 541 ntBASIC22.86■■□□□ 1.25
CDH23Q9H251 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDH23Q9H251 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.86■■□□□ 1.25
CDH23Q9H251 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.85■■□□□ 1.25
CDH23Q9H251 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 AC233263.1-201ENST00000578059 224 ntBASIC22.85■■□□□ 1.25
CDH23Q9H251 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.85■■□□□ 1.25
CDH23Q9H251 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CDH23Q9H251 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.85■■□□□ 1.25
CDH23Q9H251 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
CDH23Q9H251 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDH23Q9H251 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.85■■□□□ 1.25
CDH23Q9H251 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.85■■□□□ 1.25
CDH23Q9H251 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.85■■□□□ 1.25
CDH23Q9H251 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.84■■□□□ 1.25
CDH23Q9H251 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
CDH23Q9H251 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDH23Q9H251 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.84■■□□□ 1.25
CDH23Q9H251 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CDH23Q9H251 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.84■■□□□ 1.25
CDH23Q9H251 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.84■■□□□ 1.25
CDH23Q9H251 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDH23Q9H251 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.83■■□□□ 1.25
CDH23Q9H251 AL162412.1-201ENST00000567129 965 ntBASIC22.83■■□□□ 1.25
CDH23Q9H251 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDH23Q9H251 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.83■■□□□ 1.25
CDH23Q9H251 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.83■■□□□ 1.25
CDH23Q9H251 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CDH23Q9H251 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDH23Q9H251 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CDH23Q9H251 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CDH23Q9H251 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
CDH23Q9H251 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.24
CDH23Q9H251 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDH23Q9H251 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.83■■□□□ 1.24
CDH23Q9H251 FAM197Y4-202ENST00000622692 608 ntBASIC22.83■■□□□ 1.24
CDH23Q9H251 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.82■■□□□ 1.24
CDH23Q9H251 AC069236.1-201ENST00000604339 616 ntBASIC22.82■■□□□ 1.24
CDH23Q9H251 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDH23Q9H251 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
CDH23Q9H251 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms