Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.38■□□□□ 0.53
GFI1Q99684 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1Q99684 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GFI1Q99684 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
GFI1Q99684 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1Q99684 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.38■□□□□ 0.53
GFI1Q99684 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GFI1Q99684 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GFI1Q99684 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.37■□□□□ 0.53
GFI1Q99684 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 AC073314.1-201ENST00000568729 2216 ntBASIC18.37■□□□□ 0.53
GFI1Q99684 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
GFI1Q99684 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.37■□□□□ 0.53
GFI1Q99684 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.37■□□□□ 0.53
GFI1Q99684 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 GABARAPL3-202ENST00000624044 1851 ntBASIC18.37■□□□□ 0.53
GFI1Q99684 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.37■□□□□ 0.53
GFI1Q99684 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GFI1Q99684 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GFI1Q99684 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.36■□□□□ 0.53
GFI1Q99684 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.36■□□□□ 0.53
GFI1Q99684 KRT125P-201ENST00000546827 989 ntBASIC18.36■□□□□ 0.53
GFI1Q99684 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
GFI1Q99684 AL117332.1-201ENST00000622628 974 ntBASIC18.36■□□□□ 0.53
GFI1Q99684 AC241377.3-202ENST00000626088 1088 ntBASIC18.36■□□□□ 0.53
GFI1Q99684 AC241585.3-202ENST00000628937 1088 ntBASIC18.36■□□□□ 0.53
GFI1Q99684 AC245100.8-202ENST00000629247 1058 ntBASIC18.36■□□□□ 0.53
GFI1Q99684 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GFI1Q99684 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
GFI1Q99684 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.35■□□□□ 0.53
GFI1Q99684 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GFI1Q99684 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
GFI1Q99684 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
GFI1Q99684 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
GFI1Q99684 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
GFI1Q99684 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFI1Q99684 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.34■□□□□ 0.53
GFI1Q99684 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
GFI1Q99684 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GFI1Q99684 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFI1Q99684 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GFI1Q99684 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
GFI1Q99684 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GFI1Q99684 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.33■□□□□ 0.52
GFI1Q99684 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.33■□□□□ 0.52
GFI1Q99684 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.33■□□□□ 0.52
GFI1Q99684 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.33■□□□□ 0.52
GFI1Q99684 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.33■□□□□ 0.52
GFI1Q99684 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFI1Q99684 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
GFI1Q99684 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFI1Q99684 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.32■□□□□ 0.52
GFI1Q99684 AC007952.6-201ENST00000573168 2673 ntBASIC18.32■□□□□ 0.52
GFI1Q99684 AC003957.1-201ENST00000625108 2673 ntBASIC18.32■□□□□ 0.52
GFI1Q99684 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFI1Q99684 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms