Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.06■■□□□ 1.12
HAPLN3Q96S86 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HAPLN3Q96S86 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.06■■□□□ 1.12
HAPLN3Q96S86 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HAPLN3Q96S86 AC034268.1-201ENST00000441047 882 ntBASIC22.05■■□□□ 1.12
HAPLN3Q96S86 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
HAPLN3Q96S86 SLC25A24-204ENST00000569674 2357 ntBASIC22.05■■□□□ 1.12
HAPLN3Q96S86 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HAPLN3Q96S86 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.05■■□□□ 1.12
HAPLN3Q96S86 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L2-201ENST00000561772 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L6-201ENST00000626483 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L1-201ENST00000627662 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L8-201ENST00000629013 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L3-201ENST00000630187 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L7-201ENST00000630678 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DUX4L5-201ENST00000630834 1275 ntBASIC22.04■■□□□ 1.12
HAPLN3Q96S86 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HAPLN3Q96S86 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 AC010542.4-201ENST00000563151 1910 ntBASIC22.03■■□□□ 1.12
HAPLN3Q96S86 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.03■■□□□ 1.12
HAPLN3Q96S86 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
HAPLN3Q96S86 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.02■■□□□ 1.11
HAPLN3Q96S86 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
HAPLN3Q96S86 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.02■■□□□ 1.11
HAPLN3Q96S86 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 KRT87P-202ENST00000534226 1464 ntBASIC22.01■■□□□ 1.11
HAPLN3Q96S86 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HAPLN3Q96S86 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22■■□□□ 1.11
HAPLN3Q96S86 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22■■□□□ 1.11
HAPLN3Q96S86 AC104564.3-201ENST00000582367 638 ntBASIC22■■□□□ 1.11
HAPLN3Q96S86 MIR5787-201ENST00000611784 55 ntBASIC22■■□□□ 1.11
HAPLN3Q96S86 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22■■□□□ 1.11
HAPLN3Q96S86 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HAPLN3Q96S86 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HAPLN3Q96S86 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms