Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H2AAQ96QV6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 AC104564.3-201ENST00000582367 638 ntBASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 AC106739.1-201ENST00000617035 715 ntBASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 AP004607.7-201ENST00000527152 1677 ntBASIC18.38■□□□□ 0.53
HIST1H2AAQ96QV6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HIST1H2AAQ96QV6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 EDA-201ENST00000338901 1233 ntBASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 AC027682.1-201ENST00000562846 899 ntBASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST1H2AAQ96QV6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 AL355001.2-201ENST00000620617 1191 ntBASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 AC010542.4-201ENST00000563151 1910 ntBASIC18.35■□□□□ 0.53
HIST1H2AAQ96QV6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HIST1H2AAQ96QV6 AC099791.1-201ENST00000416440 715 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms