Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 C1QBPP2-201ENST00000528754 825 ntBASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.26■□□□□ 0.51
CSMD1Q96PZ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 AC097658.1-201ENST00000475555 843 ntBASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 AC055733.4-201ENST00000638462 1354 ntBASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 AL161729.1-201ENST00000604104 1402 ntBASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 TSPY15P-201ENST00000457163 923 ntBASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CSMD1Q96PZ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 AC009237.3-201ENST00000393279 1427 ntBASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 C9orf163-202ENST00000624034 2573 ntBASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 RPPH1-201ENST00000516869 333 ntBASIC18.24■□□□□ 0.51
CSMD1Q96PZ7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 AC233263.1-201ENST00000578059 224 ntBASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 AC016405.3-201ENST00000607710 860 ntBASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD1Q96PZ7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD1Q96PZ7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 AC133561.5-201ENST00000635547 218 ntBASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 CYP2T3P-201ENST00000601990 817 ntBASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms