Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 AC012618.2-201ENST00000428058 849 ntBASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 KRT18P20-201ENST00000548986 1279 ntBASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 AC233702.5-201ENST00000584107 538 ntBASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3BQ96NU0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3BQ96NU0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3BQ96NU0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 ALDH1A3-203ENST00000557963 1670 ntBASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 RPS2P55-201ENST00000397318 883 ntBASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AC107956.1-201ENST00000494359 873 ntBASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3BQ96NU0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 KRT17P3-201ENST00000420566 1262 ntBASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP3BQ96NU0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CNTNAP3BQ96NU0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms