Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 MIR6722-201ENST00000617286 78 ntBASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COX4I2Q96KJ9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 AC097381.1-201ENST00000429019 1296 ntBASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 AL136967.2-201ENST00000623968 743 ntBASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.57■□□□□ 0.72
COX4I2Q96KJ9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 SNX5-217ENST00000606557 1087 ntBASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 AC010542.4-201ENST00000563151 1910 ntBASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.56■□□□□ 0.72
COX4I2Q96KJ9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 MIR939-201ENST00000401314 82 ntBASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 AL162430.1-201ENST00000480705 870 ntBASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 AC079630.1-202ENST00000618127 1840 ntBASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COX4I2Q96KJ9 AC087289.5-201ENST00000586076 3175 ntBASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COX4I2Q96KJ9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 AP001330.3-201ENST00000520123 633 ntBASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COX4I2Q96KJ9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 LINC01006-201ENST00000333319 2292 ntBASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 AC091305.1-201ENST00000479476 895 ntBASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 AC087623.3-201ENST00000607047 1098 ntBASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.52■□□□□ 0.72
COX4I2Q96KJ9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms