Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IFT43Q96FT9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
IFT43Q96FT9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
IFT43Q96FT9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.83■■□□□ 1.09
IFT43Q96FT9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IFT43Q96FT9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
IFT43Q96FT9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
IFT43Q96FT9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
IFT43Q96FT9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.83■■□□□ 1.08
IFT43Q96FT9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
IFT43Q96FT9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
IFT43Q96FT9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
IFT43Q96FT9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.82■■□□□ 1.08
IFT43Q96FT9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IFT43Q96FT9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.81■■□□□ 1.08
IFT43Q96FT9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.81■■□□□ 1.08
IFT43Q96FT9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.81■■□□□ 1.08
IFT43Q96FT9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
IFT43Q96FT9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IFT43Q96FT9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IFT43Q96FT9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 KRT18P5-201ENST00000436075 1291 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L2-201ENST00000561772 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L6-201ENST00000626483 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L1-201ENST00000627662 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L8-201ENST00000629013 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L3-201ENST00000630187 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L7-201ENST00000630678 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 DUX4L5-201ENST00000630834 1275 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 C11orf96-202ENST00000528572 1834 ntBASIC21.8■■□□□ 1.08
IFT43Q96FT9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
IFT43Q96FT9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.79■■□□□ 1.08
IFT43Q96FT9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.79■■□□□ 1.08
IFT43Q96FT9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IFT43Q96FT9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IFT43Q96FT9 AC105233.4-201ENST00000642045 216 ntBASIC21.78■■□□□ 1.08
IFT43Q96FT9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms