Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 C11orf96-202ENST00000528572 1834 ntBASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC3Q96DC8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 AC006015.1-201ENST00000429970 570 ntBASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC3Q96DC8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 AC010141.2-201ENST00000452426 721 ntBASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC3Q96DC8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 AP001160.3-201ENST00000601484 763 ntBASIC21.33■■□□□ 1.01
ECHDC3Q96DC8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
ECHDC3Q96DC8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ECHDC3Q96DC8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
ECHDC3Q96DC8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC3Q96DC8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ECHDC3Q96DC8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC3Q96DC8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC3Q96DC8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.32■■□□□ 1
ECHDC3Q96DC8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.32■■□□□ 1
ECHDC3Q96DC8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ECHDC3Q96DC8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 EP400NL-214ENST00000641289 2402 ntBASIC21.31■■□□□ 1
ECHDC3Q96DC8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.31■■□□□ 1
ECHDC3Q96DC8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 AC137761.2-201ENST00000561729 223 ntBASIC21.31■■□□□ 1
ECHDC3Q96DC8 AC145350.3-201ENST00000569033 163 ntBASIC21.31■■□□□ 1
ECHDC3Q96DC8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
ECHDC3Q96DC8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ECHDC3Q96DC8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.3■■□□□ 1
ECHDC3Q96DC8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.3■■□□□ 1
ECHDC3Q96DC8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ECHDC3Q96DC8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC3Q96DC8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ECHDC3Q96DC8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.29■■□□□ 1
ECHDC3Q96DC8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.29■■□□□ 1
ECHDC3Q96DC8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC3Q96DC8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.29■■□□□ 1
ECHDC3Q96DC8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.29■■□□□ 1
ECHDC3Q96DC8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.28■■□□□ 1
ECHDC3Q96DC8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.28■■□□□ 1
ECHDC3Q96DC8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC3Q96DC8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ECHDC3Q96DC8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms