Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S1Q92572 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 AL049796.1-201ENST00000565336 1766 ntBASIC18.71■□□□□ 0.59
AP3S1Q92572 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 C17orf82-201ENST00000623772 1530 ntBASIC18.71■□□□□ 0.59
AP3S1Q92572 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 DUX4L9-201ENST00000449051 1259 ntBASIC18.71■□□□□ 0.59
AP3S1Q92572 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3S1Q92572 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.71■□□□□ 0.59
AP3S1Q92572 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S1Q92572 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S1Q92572 AC004687.1-201ENST00000579003 1625 ntBASIC18.71■□□□□ 0.58
AP3S1Q92572 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S1Q92572 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3S1Q92572 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
AP3S1Q92572 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S1Q92572 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S1Q92572 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
AP3S1Q92572 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
AP3S1Q92572 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S1Q92572 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S1Q92572 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
AP3S1Q92572 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S1Q92572 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
AP3S1Q92572 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3S1Q92572 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3S1Q92572 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 GPX1-201ENST00000419349 1106 ntBASIC18.69■□□□□ 0.58
AP3S1Q92572 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 AC120024.1-201ENST00000562672 995 ntBASIC18.69■□□□□ 0.58
AP3S1Q92572 AC019171.1-201ENST00000601251 1056 ntBASIC18.69■□□□□ 0.58
AP3S1Q92572 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
AP3S1Q92572 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3S1Q92572 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S1Q92572 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.69■□□□□ 0.58
AP3S1Q92572 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
AP3S1Q92572 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
AP3S1Q92572 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S1Q92572 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
AP3S1Q92572 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP3S1Q92572 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 MIR639-201ENST00000384974 98 ntBASIC18.67■□□□□ 0.58
AP3S1Q92572 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3S1Q92572 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.67■□□□□ 0.58
AP3S1Q92572 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AP3S1Q92572 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP3S1Q92572 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
AP3S1Q92572 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
AP3S1Q92572 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S1Q92572 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
AP3S1Q92572 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S1Q92572 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3S1Q92572 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
AP3S1Q92572 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms