Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 AL034346.1-201ENST00000568244 1277 ntBASIC8.83□□□□□ -1
SYNE2Q8WXH0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SYNE2Q8WXH0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
SYNE2Q8WXH0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 AL355385.1-201ENST00000606123 409 ntBASIC8.82□□□□□ -1
SYNE2Q8WXH0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 SLC29A4P2-201ENST00000504749 1089 ntBASIC8.82□□□□□ -1
SYNE2Q8WXH0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 AC022616.7-201ENST00000525383 220 ntBASIC8.82□□□□□ -1
SYNE2Q8WXH0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 AC244107.1-201ENST00000442033 332 ntBASIC8.82□□□□□ -1
SYNE2Q8WXH0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYNE2Q8WXH0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC8.82□□□□□ -1
SYNE2Q8WXH0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 CR769767.2-201ENST00000622735 460 ntBASIC8.81□□□□□ -1
SYNE2Q8WXH0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 LINC01568-207ENST00000641790 1380 ntBASIC8.81□□□□□ -1
SYNE2Q8WXH0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC010947.1-201ENST00000623454 693 ntBASIC8.81□□□□□ -1
SYNE2Q8WXH0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 KRT17P3-201ENST00000420566 1262 ntBASIC8.81□□□□□ -1
SYNE2Q8WXH0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC007322.4-201ENST00000509611 723 ntBASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC8.81□□□□□ -1
SYNE2Q8WXH0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYNE2Q8WXH0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 KRT8P45-201ENST00000414328 1447 ntBASIC8.8□□□□□ -1
SYNE2Q8WXH0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC8.8□□□□□ -1
SYNE2Q8WXH0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC8.8□□□□□ -1
SYNE2Q8WXH0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYNE2Q8WXH0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms