Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 RPS2P7-201ENST00000447334 885 ntBASIC14.39□□□□□ -0.11
COPS9Q8WXC6 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 AC007029.1-201ENST00000604183 313 ntBASIC14.39□□□□□ -0.11
COPS9Q8WXC6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.39□□□□□ -0.11
COPS9Q8WXC6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 AC007952.6-201ENST00000573168 2673 ntBASIC14.38□□□□□ -0.11
COPS9Q8WXC6 AC003957.1-201ENST00000625108 2673 ntBASIC14.38□□□□□ -0.11
COPS9Q8WXC6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 AL157384.1-201ENST00000445995 2473 ntBASIC14.38□□□□□ -0.11
COPS9Q8WXC6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 AC104564.3-201ENST00000582367 638 ntBASIC14.38□□□□□ -0.11
COPS9Q8WXC6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
COPS9Q8WXC6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
COPS9Q8WXC6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS9Q8WXC6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COPS9Q8WXC6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms