Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 AL499627.2-201ENST00000606283 725 ntBASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CKAP2Q8WWK9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CKAP2Q8WWK9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 AFG3L1P-217ENST00000557444 2447 ntBASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CKAP2Q8WWK9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 AC006128.1-201ENST00000624704 1661 ntBASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 AC010980.1-201ENST00000587192 1142 ntBASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 AC137630.3-201ENST00000607245 391 ntBASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKAP2Q8WWK9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 AL391422.3-201ENST00000603791 2761 ntBASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.09■□□□□ 0.97
CKAP2Q8WWK9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CKAP2Q8WWK9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.08■□□□□ 0.97
CKAP2Q8WWK9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.08■□□□□ 0.97
CKAP2Q8WWK9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
CKAP2Q8WWK9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms