Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSMEM1Q8WWF3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 RARRES2P11-201ENST00000635158 484 ntBASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 BX005040.4-201ENST00000637145 1518 ntBASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSMEM1Q8WWF3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSMEM1Q8WWF3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SSMEM1Q8WWF3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 AC092053.2-201ENST00000640557 1818 ntBASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 AC090192.1-201ENST00000517740 490 ntBASIC17.52■□□□□ 0.4
SSMEM1Q8WWF3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms