Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 UNC93B5-201ENST00000530315 699 ntBASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 EEF1DP3-203ENST00000566025 782 ntBASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 AC073648.6-201ENST00000641589 218 ntBASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNIP1Q8TAD8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 UBE2SP1-201ENST00000450587 669 ntBASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNIP1Q8TAD8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 AP003097.1-201ENST00000530657 1135 ntBASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 AL162412.1-201ENST00000567129 965 ntBASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 AC053503.5-201ENST00000601508 636 ntBASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
SNIP1Q8TAD8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNIP1Q8TAD8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNIP1Q8TAD8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNIP1Q8TAD8 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 LINC00543-201ENST00000567234 1845 ntBASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNIP1Q8TAD8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 MIR718-201ENST00000390190 70 ntBASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 AC010980.2-201ENST00000587099 1412 ntBASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SNIP1Q8TAD8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms